MolNFT v1 · #167848 · protein
Crystal structure of hydroxyproline dehydratase (hypd) from clostridioides difficile
6VXC: “Crystal structure of hydroxyproline dehydratase (hypd) from clostridioides difficile”. X-ray diffraction. MolNFT v1 #167848 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VXC
- Type
- protein
- Length
- 6,312 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A031WDE4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H | — | protein | 789 | — | A0A031WDE4 |
Ligands and binding sites
- GOL · Glycerol · additive · 8 copies · chains A, B, C, D, E, F, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VXC · Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A031WDE4
- Elsewhere: RCSB PDB 6VXC · PDBe 6VXC · UniProt A0A031WDE4
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