MolNFT v1 · #167773 · protein

Scabin (S117A) toxin from streptomyces scabies

6VUV: “Scabin (S117A) toxin from streptomyces scabies”. X-ray diffraction, 2 pockets (best druggability 0.63). MolNFT v1 #167773 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6VUV
Type: protein
Length: 165 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Scabin
UniProt: C9Z6T8
Pockets: 2 · best druggability 0.63

Structure

x-ray diffraction · 1 distinct chain · 22% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Scabin	protein	165	22% helix, 24% strand	C9Z6T8

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	268	0.63	0.81	34	empty
2	53	0.39	0.81	19	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

6VUV · Scabin (S117A) toxin from Streptomyces scabies · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C9Z6T8
Elsewhere: RCSB PDB 6VUV · PDBe 6VUV · UniProt C9Z6T8

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