MolNFT v1 · #167704 · protein
Arginase from medicago truncatula in complex with ornithine
6VST: “Arginase from medicago truncatula in complex with ornithine”. X-ray diffraction, 1 ligand (MN). MolNFT v1 #167704 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VST
- Type
- protein
- Length
- 3,831 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G7JFU5
- Ligands
- MN
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 318 | — | G7JFU5 |
| B, J | — | protein | 319 | — | G7JFU5 |
| C, K | — | protein | 318 | — | G7JFU5 |
| D, F, H | — | protein | 321 | — | G7JFU5 |
| E | — | protein | 319 | — | G7JFU5 |
| G | — | protein | 320 | — | G7JFU5 |
| I | — | protein | 317 | — | G7JFU5 |
| L | — | protein | 320 | — | G7JFU5 |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 24 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VST · Arginase from Medicago truncatula in complex with ornithine · the same entry in another collection · chain C against C, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G7JFU5
- Elsewhere: RCSB PDB 6VST · PDBe 6VST · UniProt G7JFU5
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