MolNFT v1 · #167703 · protein

Arginase from medicago truncatula

6VSS: “Arginase from medicago truncatula”. X-ray diffraction, 1 ligand (MN). MolNFT v1 #167703 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6VSS
Type: protein
Length: 1,905 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: G7JFU5
Ligands: MN

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	316	—	G7JFU5
B	—	protein	319	—	G7JFU5
C, D, F	—	protein	318	—	G7JFU5
E	—	protein	316	—	G7JFU5

Ligands and binding sites

MN · Manganese (II) ion · metal · 12 copies · chains A, B, C, D, E, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6VSS · Arginase from Medicago truncatula · the same entry in another collection · chain F against F, TM-score 1.00
G7JFU5 · AlphaFold monomer V2.0 prediction for arginase, mitochondrial (G7JFU5) · a predicted model of the same protein · chain D against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G7JFU5
Elsewhere: RCSB PDB 6VSS · PDBe 6VSS · UniProt G7JFU5

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