MolNFT v1 · #167696 · protein
Cryo-electron microscopy structure of mouse coronavirus spike protein complexed with its murine receptor
6VSJ: “Cryo-electron microscopy structure of mouse coronavirus spike protein complexed with its murine receptor”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #167696 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VSJ
- Type
- protein
- Length
- 3,687 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P11224, P31809
- Ligands
- NAG
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 1122 | — | P11224 |
| D, E, F | — | protein | 107 | — | P31809 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 12 copies · chains A, D, B, E, C, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VSJ · Cryo-electron microscopy structure of mouse coronavirus spike protein complexed with its… · the same entry in another collection · chain F against F, TM-score 1.00
- P31809 · AlphaFold monomer V2.0 prediction for carcinoembryonic antigen- related cell adhesion… · a predicted model of the same protein · chain F against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11224
- Every structure of UniProt P31809
- Elsewhere: RCSB PDB 6VSJ · PDBe 6VSJ · UniProt P11224 · UniProt P31809
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