MolNFT v1 · #167616 · protein
Mammalian V-ATPase from rat brain soluble V1 region rotational state 2 with sidk and ADP (from focused refinement)
6VQA: “Mammalian V-ATPase from rat brain soluble V1 region rotational state 2 with sidk and ADP (from focused…”. Electron microscopy, 2 ligands (ADP, MG). MolNFT v1 #167616 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VQA
- Type
- protein
- Length
- 4,578 residues
- Chains
- 16
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- D4A133, P62815, Q6P503, Q6PCU2, Q8R2H0, Q5ZWW6
- Ligands
- ADP, MG
Structure
electron microscopy · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 600 | — | D4A133 |
| D, E, F | — | protein | 459 | — | P62815 |
| H | — | protein | 109 | — | Q6P503 |
| I, J, K | — | protein | 161 | — | Q6PCU2 |
| M, N, O | — | protein | 47 | — | Q8R2H0 |
| Q | — | protein | 212 | — | Q5ZWW6 |
| R | — | protein | 232 | — | Q5ZWW6 |
| S | — | protein | 224 | — | Q5ZWW6 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VQA · Mammalian V-ATPase from rat brain soluble V1 region rotational state 2 with SidK and ADP… · the same entry in another collection · chain S against S, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D4A133
- Every structure of UniProt P62815
- Every structure of UniProt Q6P503
- Every structure of UniProt Q6PCU2
- Every structure of UniProt Q8R2H0
- Every structure of UniProt Q5ZWW6
- Elsewhere: RCSB PDB 6VQA · PDBe 6VQA · UniProt D4A133 · UniProt P62815 · UniProt Q6P503 · UniProt Q6PCU2 · UniProt Q8R2H0 · UniProt Q5ZWW6
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