GL1X · GenesisL1 explorer

MolNFT v1 · #167604 · protein

1.90 ångström resolution crystal structure phosphoadenosine phosphosulfate reductase (cysh) from vibrio vulnificus

6VPU: “1.90 ångström resolution crystal structure phosphoadenosine phosphosulfate reductase (cysh) from vibrio…”. X-ray diffraction. MolNFT v1 #167604 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6VPU
Type
protein
Length
1,801 residues
Chains
8
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q8CWK6

Structure

x-ray diffraction · 8 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein224—Q8CWK6
B—protein231—Q8CWK6
C—protein212—Q8CWK6
D—protein230—Q8CWK6
E—protein222—Q8CWK6
F—protein230—Q8CWK6
G—protein226—Q8CWK6
H—protein226—Q8CWK6

Ligands and binding sites

  • PG4 · Tetraethylene glycol · additive · chains A
  • PEG · Di(hydroxyethyl)ether · additive · chains B
  • P6G · Hexaethylene glycol · additive · chains D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6VPU · 1.90 Angstrom Resolution Crystal Structure Phosphoadenosine Phosphosulfate Reductase… · the same entry in another collection · chain H against H, TM-score 1.00
  • Q8CWK6 · AlphaFold monomer V2.0 prediction for phosphoadenosine 5'-phosphosulfate reductase… · a predicted model of the same protein · chain C against A, TM-score 0.97

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