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MolNFT v1 · #167547 · protein

X-ray structure of the CJ1427 in the presence of NADH and GDP-D- glycero-D-mannoheptose, an essential NAD-dependent dehydrogenase from campylobacter jejuni

6VO8: “X-ray structure of the CJ1427 in the presence of NADH and GDP-D- glycero-D-mannoheptose, an essential…”. X-ray diffraction, 2 ligands (NAI, GZ0). MolNFT v1 #167547 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6VO8
Type
protein
Length
602 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q0P8I7
Ligands
NAI, GZ0

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein303—Q0P8I7
B—protein299—Q0P8I7

Ligands and binding sites

  • NAI · 1,4-dihydronicotinamide adenine dinucleotide · ligand · 2 copies · chains A, B
  • GZ0 · [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-3,4-bis(oxidanyl) oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R}, 3~{S},4~{S},5~{S},6~{S})-6-[(1~{S})-1,2-bis(oxidanyl) ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6VO8 · X-ray structure of the Cj1427 in the presence of NADH and GDP-D-glycero-D-mannoheptose… · the same entry in another collection · chain A against A, TM-score 1.00

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