MolNFT v1 · #167489 · protein
Chloroplast ATP synthase (C1, CF1FO)
6VMB: “Chloroplast ATP synthase (C1, CF1FO)”. Electron microscopy, 2 ligands (ATP, ADP). MolNFT v1 #167489 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VMB
- Type
- protein
- Length
- 5,194 residues
- Chains
- 26
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P06450, P00825, P06453, P31853, P06451, P11402, P00833, P05435, P69447
- Ligands
- ATP, ADP
Structure
electron microscopy · 13 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 501 | — | P06450 |
| B | — | protein | 503 | — | P06450 |
| C | — | protein | 500 | — | P06450 |
| D | — | protein | 478 | — | P00825 |
| E | — | protein | 481 | — | P00825 |
| F | — | protein | 480 | — | P00825 |
| I | — | protein | 153 | — | P06453 |
| J | — | protein | 136 | — | P31853 |
| a | — | protein | 223 | — | P06451 |
| d | — | protein | 179 | — | P11402 |
| e | — | protein | 131 | — | P00833 |
| g | — | protein | 323 | — | P05435 |
| Z, Y, X, W, V, U, T, S, P, O, N, M, Q, R | — | protein | 79 | — | P69447 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 3 copies · chains A, D, B, E, C, F
- ADP · Adenosine-5'-diphosphate · ligand · 2 copies · chains B, D, A, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VMB · Chloroplast ATP synthase (C1, CF1FO) · the same entry in another collection · chain J against J, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06450
- Every structure of UniProt P00825
- Every structure of UniProt P06453
- Every structure of UniProt P31853
- Every structure of UniProt P06451
- Every structure of UniProt P11402
- Every structure of UniProt P00833
- Every structure of UniProt P05435
- Every structure of UniProt P69447
- Elsewhere: RCSB PDB 6VMB · PDBe 6VMB · UniProt P06450 · UniProt P00825 · UniProt P06453 · UniProt P31853 · UniProt P06451 · UniProt P11402 · UniProt P00833 · UniProt P05435 · UniProt P69447
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