MolNFT v1 · #167484 · protein + RNA
Structure of acinetobacter baumannii CAP4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-caaa
6VM6: “Structure of acinetobacter baumannii CAP4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide…”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #167484 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VM6
- Type
- protein + RNA
- Length
- 2,641 residues
- Chains
- 11
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- C0VHC9
- Ligands
- SO4
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 438 | — | C0VHC9 |
| B, D | — | protein | 440 | — | C0VHC9 |
| C | — | protein | 439 | — | C0VHC9 |
| E | — | protein | 432 | — | C0VHC9 |
| F | — | protein | 437 | — | C0VHC9 |
| G, H, I, J, K | — | rna | 3 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 8 copies · chains A, B, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VM6 · Structure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the… · the same entry in another collection · chain K against K, TM-score 1.00
- C0VHC9 · AlphaFold monomer V2.0 prediction for CD-ntase-associated protein 4 (C0VHC9) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C0VHC9
- Elsewhere: RCSB PDB 6VM6 · PDBe 6VM6 · UniProt C0VHC9
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