MolNFT v1 · #167483 · protein

Structure of moraxella osloensis CAP4 SAVED/CARF-domain containing receptor

6VM5 · Saved domain-containing protein: “Structure of moraxella osloensis CAP4 SAVED/CARF-domain containing receptor”. X-ray diffraction, 1 ligand (MG), 5 pockets (best druggability 0.44). MolNFT v1 #167483 on GenesisL1: 3D structure…

PDB: 6VM5
Type: protein
Length: 420 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Saved domain-containing protein
UniProt: A0A2K8K5C5
Ligands: MG
Pockets: 5 · best druggability 0.44

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Saved domain-containing protein	protein	420	42% helix, 22% strand	A0A2K8K5C5

Ligands and binding sites

MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	140	0.44	0.76	26	empty
2	75	0.36	0.77	19	empty
3	89	0.33	0.73	21	empty
4	71	0.31	0.74	15	empty
5	61	0.30	0.75	14	empty

Compared structures

6VM5 · Structure of Moraxella osloensis Cap4 SAVED/CARF-domain containing receptor · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A2K8K5C5
Elsewhere: RCSB PDB 6VM5 · PDBe 6VM5 · UniProt A0A2K8K5C5

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