MolNFT v1 · #167465 · protein
Core catalytic domain of HIV integrase in complex with virtual screening hit
6VLM: “Core catalytic domain of HIV integrase in complex with virtual screening hit”. X-ray diffraction, 1 ligand (R2D). MolNFT v1 #167465 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VLM
- Type
- protein
- Length
- 299 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0U2U525
- Ligands
- R2D
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 150 | — | A0A0U2U525 |
| B | — | protein | 149 | — | A0A0U2U525 |
Ligands and binding sites
- R2D · [3-(4-chlorophenyl)[1,3]thiazolo[3,2-a]benzimidazol-2-yl]acetic acid · ligand · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VLM · Core Catalytic Domain of HIV Integrase in complex with virtual screening hit · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0U2U525
- Elsewhere: RCSB PDB 6VLM · PDBe 6VLM · UniProt A0A0U2U525
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