MolNFT v1 · #167441 · protein
Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain BM13851
6VKX: “Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain BM13851”. X-ray diffraction. MolNFT v1 #167441 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VKX
- Type
- protein
- Length
- 469 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- M4VSS2
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 157 | — | M4VSS2 |
| B | — | protein | 155 | — | M4VSS2 |
Ligands and binding sites
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A, B
- PG4 · Tetraethylene glycol · additive · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VKX · Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt M4VSS2
- Elsewhere: RCSB PDB 6VKX · PDBe 6VKX · UniProt M4VSS2
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