MolNFT v1 · #167378 · protein
BRD4_BROMODOMAIN1 complex with pyrrolopyridone compound 27
6VIZ: “BRD4_BROMODOMAIN1 complex with pyrrolopyridone compound 27”. X-ray diffraction, 1 ligand (QYY). MolNFT v1 #167378 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VIZ
- Type
- protein
- Length
- 318 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O60885
- Ligands
- QYY
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 106 | — | O60885 |
Ligands and binding sites
- QYY · 4-[2-(2,6-dimethylphenoxy)-5-(ethylsulfonyl)phenyl]-N-ethyl-6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide · ligand · 3 copies · chains A, C, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VIZ · BRD4_Bromodomain1 complex with pyrrolopyridone compound 27 · the same entry in another collection · chain A against A, TM-score 1.00
- O60885 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 4 (O60885) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O60885
- Elsewhere: RCSB PDB 6VIZ · PDBe 6VIZ · UniProt O60885
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