MolNFT v1 · #167359 · protein
The crystal structure of aps domain-swapped trimer Q108K:K40D:T53A:R58L:Q38F:Q4F variant of hcrbpii
6VID: “The crystal structure of aps domain-swapped trimer Q108K:K40D:T53A:R58L:Q38F:Q4F variant of hcrbpii”. X-ray diffraction. MolNFT v1 #167359 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VID
- Type
- protein
- Length
- 796 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P50120
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E | — | protein | 133 | — | P50120 |
| F | — | protein | 131 | — | P50120 |
Ligands and binding sites
- GOL · Glycerol · additive · 5 copies · chains A, B, D
- ACT · Acetate ion · additive · 4 copies · chains A, D, B, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VID · The Crystal Structure of Aps Domain-Swapped Trimer Q108K:K40D:T53A:R58L:Q38F:Q4F Variant… · the same entry in another collection · chain C against C, TM-score 1.00
- P50120 · AlphaFold monomer V2.0 prediction for retinol-binding protein 2 (P50120) · a predicted model of the same protein · chain A against A, TM-score 0.56
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P50120
- Elsewhere: RCSB PDB 6VID · PDBe 6VID · UniProt P50120
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