MolNFT v1 · #167311 · protein

Crystal structure of vidal intein (selenomethionine variant)

6VGW: “Crystal structure of vidal intein (selenomethionine variant)”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #167311 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6VGW
Type: protein
Length: 145 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Vidal
Ligands: SO4

Structure

x-ray diffraction · 1 distinct chain · 9% helix, 59% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Vidal	protein	145	9% helix, 59% strand	—

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A
GOL · Glycerol · additive · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 5 modified (engineered).

Compared structures

6VGW · Crystal structure of VidaL intein (selenomethionine variant) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6VGW · PDBe 6VGW

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