MolNFT v1 · #167286 · protein
Denguev-2 capsid ST148 inhibitor complex
6VG5: “Denguev-2 capsid ST148 inhibitor complex”. X-ray diffraction, 2 ligands (QWY, NO3). MolNFT v1 #167286 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VG5
- Type
- protein
- Length
- 162 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A2D2BF61
- Ligands
- QWY, NO3
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 81 | — | A0A2D2BF61 |
Ligands and binding sites
- QWY · 3-amino-N-(5-phenyl-1,3,4-thiadiazol-2-yl)-6,7,8,9-tetrahydro-5H-cyclohepta[b]thieno[3,2-e]pyridine-2-carboxamide · ligand · chains A, B
- NO3 · Nitrate ion · ion · 14 copies · chains A, B
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VG5 · DengueV-2 Capsid ST148 inhibitor Complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2D2BF61
- Elsewhere: RCSB PDB 6VG5 · PDBe 6VG5 · UniProt A0A2D2BF61
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