MolNFT v1 · #167200 · protein
Crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate and NADH4.
6VDJ: “Crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate and NADH4.”. X-ray diffraction, 2 ligands (TXD, SO4). MolNFT v1 #167200 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VDJ
- Type
- protein
- Length
- 625 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- TXD, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 308 | — | — |
| B | — | protein | 317 | — | — |
Ligands and binding sites
- TXD · 1,4,5,6-tetrahydronicotinamide adenine dinucleotide · ligand · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VDJ · Crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate and NADH4. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6VDJ · PDBe 6VDJ
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