MolNFT v1 · #167178 · protein
Crystal structure of arabidopsis thaliana S-adenosylmethionine synthase 1 (ATMAT1)
6VCX: “Crystal structure of arabidopsis thaliana S-adenosylmethionine synthase 1 (ATMAT1)”. X-ray diffraction, 3 ligands (MG, CL, SO4). MolNFT v1 #167178 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VCX
- Type
- protein
- Length
- 386 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P23686
- Ligands
- MG, CL, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 386 | — | P23686 |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains A
- CL · Chloride ion · ion · 8 copies · chains A
- SO4 · Sulfate ion · ion · 3 copies · chains A
- BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VCX · Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 1 (AtMAT1) · the same entry in another collection · chain A against A, TM-score 1.00
- P23686 · AlphaFold monomer V2.0 prediction for S-adenosylmethionine synthase 1 (P23686) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P23686
- Elsewhere: RCSB PDB 6VCX · PDBe 6VCX · UniProt P23686
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