MolNFT v1 · #167131 · protein
Crystal structure of a S310A mutant of PBP2 from neisseria gonorrhoeae
6VBM: “Crystal structure of a S310A mutant of PBP2 from neisseria gonorrhoeae”. X-ray diffraction, 1 ligand (PO4). MolNFT v1 #167131 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VBM
- Type
- protein
- Length
- 640 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P08149
- Ligands
- PO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 315 | — | P08149 |
| B | — | protein | 325 | — | P08149 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · 2 copies · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VBM · Crystal structure of a S310A mutant of PBP2 from Neisseria gonorrhoeae · the same entry in another collection · chain A against A, TM-score 1.00
- P08149 · AlphaFold monomer V2.0 prediction for probable peptidoglycan D,D-transpeptidase pena… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08149
- Elsewhere: RCSB PDB 6VBM · PDBe 6VBM · UniProt P08149
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.