GL1X · GenesisL1 explorer

MolNFT v1 · #166924 · protein

Coiled-coil trimer with GLU:NORLEUCINE:LYS triad

6V58: “Coiled-coil trimer with GLU:NORLEUCINE:LYS triad”. X-ray diffraction, 1 ligand (ACE). MolNFT v1 #166924 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6V58
Type
protein
Length
65 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Coiled-coil trimer with GLU:NORLEUCINE:LYS triad
Ligands
ACE

Structure

x-ray diffraction · 2 distinct chains · 88% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACoiled-coil trimer with GLU:NORLEUCINE:LYS triadprotein3391% helix, 0% strand—
BCoiled-coil trimer with GLU:NORLEUCINE:LYS triadprotein3284% helix, 0% strand—

Ligands and binding sites

  • ACE · Acetyl group · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 332 Ų buried · 0 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 covalent, 2 modified (covalent ligand, nonstandard).

Compared structures

  • 6V58 · Coiled-coil Trimer with Glu:Norleucine:Lys Triad · the same entry in another collection · chain A against A, TM-score 1.00

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