MolNFT v1 · #166891 · protein
An open conformation of a pentameic ligand-gated ion channel with additional N-terminal domain
6V4A: “An open conformation of a pentameic ligand-gated ion channel with additional N-terminal domain”. X-ray diffraction, 1 ligand (P3A). MolNFT v1 #166891 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6V4A
- Type
- protein
- Length
- 2,955 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- V4JF97
- Ligands
- P3A
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 589 | — | V4JF97 |
| E, D | — | protein | 592 | — | V4JF97 |
| C | — | protein | 593 | — | V4JF97 |
Ligands and binding sites
- P3A · Phosphatidylglycerol-phosphoglycerol · ligand · 5 copies · chains A, B, E, D, C
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 5 copies · chains A, E, D, C, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6V4A · An open conformation of a Pentameic ligand-gated ion channel with additional N-terminal… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt V4JF97
- Elsewhere: RCSB PDB 6V4A · PDBe 6V4A · UniProt V4JF97
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