MolNFT v1 · #166872 · protein
The bigi domain of beta protein from S. agalactiae bound to CEACAM1
6V3P: “The bigi domain of beta protein from S. agalactiae bound to CEACAM1”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #166872 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6V3P
- Type
- protein
- Length
- 421 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P13688, P27951
- Ligands
- SO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 108 | — | P13688 |
| B | — | protein | 107 | — | P13688 |
| C, D | — | protein | 103 | — | P27951 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 5 copies · chains A, B, D
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6V3P · The BIgI domain of beta protein from S. agalactiae bound to CEACAM1 · the same entry in another collection · chain D against D, TM-score 1.00
- P13688 · AlphaFold monomer V2.0 prediction for carcinoembryonic antigen- related cell adhesion… · a predicted model of the same protein · chain B against A, TM-score 0.98
- P27951 · AlphaFold monomer V2.0 prediction for IgA Fc receptor (P27951) · a predicted model of the same protein · chain D against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P13688
- Every structure of UniProt P27951
- Elsewhere: RCSB PDB 6V3P · PDBe 6V3P · UniProt P13688 · UniProt P27951
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