MolNFT v1 · #166867 · protein
KIR3DL1 in complex with HLA-B*57:03 presenting the peptide lsspvtksf
6V3J: “KIR3DL1 in complex with HLA-B*57:03 presenting the peptide lsspvtksf”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #166867 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6V3J
- Type
- protein
- Length
- 672 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- I3ZN84, P61769, P43629
- Ligands
- NAG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 275 | — | I3ZN84 |
| B | — | protein | 100 | — | P61769 |
| C | — | protein | 9 | — | — |
| G | — | protein | 288 | — | P43629 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6V3J · KIR3DL1 in complex with HLA-B*57:03 presenting the peptide LSSPVTKSF · the same entry in another collection · chain A against A, TM-score 1.00
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.99
- P43629 · AlphaFold monomer V2.0 prediction for killer cell immunoglobulin-like receptor 3DL1… · a predicted model of the same protein · chain G against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I3ZN84
- Every structure of UniProt P61769
- Every structure of UniProt P43629
- Elsewhere: RCSB PDB 6V3J · PDBe 6V3J · UniProt I3ZN84 · UniProt P61769 · UniProt P43629
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