MolNFT v1 · #166708 · protein
Structure of hepatitis C virus envelope glycoprotein E2MC3-V1 redesigned core from genotype 6A bound to broadly neutralizing antibody AR3B
6UYF: “Structure of hepatitis C virus envelope glycoprotein E2MC3-V1 redesigned core from genotype 6A bound to…”. X-ray diffraction, 3 ligands (NAG, BMA, MAN). MolNFT v1 #166708 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UYF
- Type
- protein
- Length
- 586 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- NAG, BMA, MAN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H | — | protein | 218 | — | — |
| L | — | protein | 214 | — | — |
| E | — | protein | 154 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 7 copies · chains H, L, E
- BMA · beta-D-mannopyranose · sugar
- MAN · alpha-D-mannopyranose · sugar
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UYF · Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v1 redesigned core from… · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6UYF · PDBe 6UYF
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