MolNFT v1 · #166707 · protein
Ebov gpdmuc makona bound to rebov-548 Fab
6UYE: “Ebov gpdmuc makona bound to rebov-548 Fab”. Electron microscopy, 3 ligands (NAG, MAN, BMA). MolNFT v1 #166707 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UYE
- Type
- protein
- Length
- 1,686 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1C4HDL5, A0A1C4HDV6
- Ligands
- NAG, MAN, BMA
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 231 | — | A0A1C4HDL5 |
| D, E, F | — | protein | 91 | — | A0A1C4HDV6 |
| G, H, I | — | protein | 132 | — | — |
| J, K, L | — | protein | 108 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 24 copies · chains A, G, D, B, H, E, C, I, F
- MAN · alpha-D-mannopyranose · sugar · 9 copies · chains A, B, C
- BMA · beta-D-mannopyranose · sugar · 6 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UYE · EBOV GPdMuc Makona bound to rEBOV-548 Fab · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1C4HDL5
- Every structure of UniProt A0A1C4HDV6
- Elsewhere: RCSB PDB 6UYE · PDBe 6UYE · UniProt A0A1C4HDL5 · UniProt A0A1C4HDV6
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