MolNFT v1 · #16668 · protein
Crystal structure of a DUF861 family protein (TM1112) from thermotoga maritima at 1.83 a resolution
1O5U · Novel thermotoga maritima enzyme TM1112: “Crystal structure of a DUF861 family protein (TM1112) from thermotoga maritima at 1.83 a resolution”. X-ray diffraction, 1 ligand (UNL), 1 pocket (best druggability 0.46). MolNFT v1 #16668…
- PDB
- 1O5U
- Type
- protein
- Length
- 176 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Novel thermotoga maritima enzyme TM1112
- UniProt
- Q9X0J6
- Ligands
- UNL
- Pockets
- 1 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 59% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Novel thermotoga maritima enzyme TM1112 | protein | 88 | 11% helix, 59% strand | Q9X0J6 |
Ligands and binding sites
- UNL · Unknown ligand · ligand · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 162 | 0.46 | 0.76 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 359 Ų buried · 6 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 covalent (covalent ligand).
Compared structures
- 1O5U · Crystal structure of a duf861 family protein (tm1112) from thermotoga maritima at 1.83 A… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9X0J6
- Elsewhere: RCSB PDB 1O5U · PDBe 1O5U · UniProt Q9X0J6
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