MolNFT v1 · #166603 · protein

Crystal structure of BCL-xl bound to compound 2: (2R)-3- (benzylsulfanyl)-2-({[(4-METHYLPHENYL)METHYL] [(4 phenylphenyl) carbonyl] CARBAMOYL}AMINO) propanoic acid

6UVD: “Crystal structure of BCL-xl bound to compound 2: (2R)-3- (benzylsulfanyl)-2-({[(4-METHYLPHENYL)METHYL] [(4…”. X-ray diffraction, 2 ligands (XOU, SO4). MolNFT v1 #166603 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6UVD
Type: protein
Length: 283 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q07817
Ligands: XOU, SO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	145	—	Q07817
B	—	protein	138	—	Q07817

Ligands and binding sites

XOU · (2R)-3-(Benzylsulfanyl)-2-({[(4-methylphenyl)methyl] [(4 phenylphenyl)carbonyl] carbamoyl}amino) propanoic acid · ligand · 2 copies · chains A, B
SO4 · Sulfate ion · ion · 3 copies · chains A, B
EDO · 1,2-ethanediol · additive · 11 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6UVD · Crystal structure of BCL-XL bound to compound 2… · the same entry in another collection · chain A against A, TM-score 1.00
Q07817 · AlphaFold monomer V2.0 prediction for BCL-2-like protein 1 (Q07817) · a predicted model of the same protein · chain B against A, TM-score 0.77

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q07817
Elsewhere: RCSB PDB 6UVD · PDBe 6UVD · UniProt Q07817

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.