MolNFT v1 · #166569 · protein
Crystal structure of antibody 5D5 in complex with pfcsp N-terminal peptide
6UUD: “Crystal structure of antibody 5D5 in complex with pfcsp N-terminal peptide”. X-ray diffraction, 2 ligands (NAG, FUC). MolNFT v1 #166569 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UUD
- Type
- protein
- Length
- 445 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- NAG, FUC
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H | — | protein | 220 | — | — |
| L | — | protein | 213 | — | — |
| A | — | protein | 12 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains H, L, A
- FUC · alpha-L-fucopyranose · sugar
- EDO · 1,2-ethanediol · additive · chains H, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UUD · Crystal structure of antibody 5D5 in complex with PfCSP N-terminal peptide · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6UUD · PDBe 6UUD
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