MolNFT v1 · #166158 · protein
X-ray structure of C148 mgfp
6UHJ: “X-ray structure of C148 mgfp”. X-ray diffraction, 1 ligand (CRO), 2 pockets (best druggability 0.76). MolNFT v1 #166158 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UHJ
- Type
- protein
- Length
- 225 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- C148 mgfp
- Ligands
- CRO
- Pockets
- 2 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 12% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | C148 mgfp | protein | 225 | 12% helix, 53% strand | — |
Ligands and binding sites
- CRO · {2-[(1R,2R)-1-amino-2-hydroxypropyl]-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 94 | 0.76 | 0.97 | 24 | CRO |
| 2 | 69 | 0.31 | 0.74 | 17 | empty |
Modifications
Observed in the structure: 2 cofactor (chromophore).
Compared structures
- 6UHJ · X-ray Structure of C148 mGFP · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6UHJ · PDBe 6UHJ
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