MolNFT v1 · #166062 · RNA
Apo SAM-IV riboswitch
6UES · RNA (119-mer): “Apo SAM-IV riboswitch”. Electron microscopy, 4 pockets (best druggability 0.77). MolNFT v1 #166062 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UES
- Type
- RNA
- Length
- 119 nucleotides
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (119-mer)
- Pockets
- 4 · best druggability 0.77
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (119-mer) | rna | 119 | — | — |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1102 | 0.77 | 0.80 | 50 | empty |
| 2 | 355 | 0.50 | 0.73 | 23 | empty |
| 3 | 128 | 0.36 | 0.73 | 14 | empty |
| 4 | 89 | 0.35 | 0.76 | 9 | empty |
Compared structures
- 6UES · Apo SAM-IV Riboswitch · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6UES · PDBe 6UES
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