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MolNFT v1 · #166047 · protein

Pseudomonas aeruginosa lpxd complex structure with ligand

6UEC: “Pseudomonas aeruginosa lpxd complex structure with ligand”. X-ray diffraction, 2 ligands (Q5M, MG). MolNFT v1 #166047 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6UEC
Type
protein
Length
337 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9HXY6
Ligands
Q5M, MG

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein337—Q9HXY6

Ligands and binding sites

  • Q5M · 4-(naphthalen-1-yl)-4-oxobutanoic acid · ligand · chains A
  • MG · Magnesium ion · metal
  • DMS · Dimethyl sulfoxide · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6UEC · Pseudomonas aeruginosa LpxD Complex Structure with Ligand · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9HXY6 · AlphaFold monomer V2.0 prediction for udp-3-O-acylglucosamine N-acyltransferase (Q9HXY6) · a predicted model of the same protein · chain A against A, TM-score 0.98

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