MolNFT v1 · #166024 · DNA
Crystal structure of a self-assembling DNA scaffold containing ta sticky ends and rhombohedral symmetry
6UDN: “Crystal structure of a self-assembling DNA scaffold containing ta sticky ends and rhombohedral symmetry”. X-ray diffraction, 1 ligand (ARS). MolNFT v1 #166024 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UDN
- Type
- DNA
- Length
- 42 nucleotides
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- ARS
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | dna | 21 | — | — |
| A | — | dna | 7 | — | — |
| C | — | dna | 9 | — | — |
| D | — | dna | 5 | — | — |
Ligands and binding sites
- ARS · Arsenic · metal · 2 copies · chains D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UDN · Crystal Structure of a Self-Assembling DNA Scaffold Containing TA Sticky Ends and… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6UDN · PDBe 6UDN
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