MolNFT v1 · #165853 · protein
BRD4-BD2 in complex with the cyclic peptide 3.1_2_ACK7TOA
6U8G: “BRD4-BD2 in complex with the cyclic peptide 3.1_2_ACK7TOA”. X-ray diffraction, 2 ligands (ACE, NH2). MolNFT v1 #165853 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6U8G
- Type
- protein
- Length
- 495 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O60885
- Ligands
- ACE, NH2
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 126 | — | O60885 |
| C | — | protein | 108 | — | O60885 |
| D | — | protein | 107 | — | O60885 |
| E, F | — | protein | 14 | — | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · 2 copies · chains E, F
- NH2 · Amino group · ion · 2 copies · chains E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6U8G · BRD4-BD2 in complex with the cyclic peptide 3.1_2_AcK7toA · the same entry in another collection · chain F against F, TM-score 1.00
- O60885 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 4 (O60885) · a predicted model of the same protein · chain C against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O60885
- Elsewhere: RCSB PDB 6U8G · PDBe 6U8G · UniProt O60885
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