MolNFT v1 · #165810 · RNA
Solution NMR structure of 5' utr stem loop B from west nile virus
6U79 · 5' utr region stem loop: “Solution NMR structure of 5' utr stem loop B from west nile virus”. Solution nmr, 2 pockets (best druggability 0.24). MolNFT v1 #165810 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6U79
- Type
- RNA
- Length
- 37 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5' utr region stem loop
- Pockets
- 2 · best druggability 0.24
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5' utr region stem loop | rna | 37 | — | — |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.24 | 0.73 | 12 | empty |
| 2 | 50 | 0.22 | 0.72 | 8 | empty |
Compared structures
- 6U79 · Solution NMR structure of 5' UTR stem loop B from West Nile Virus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6U79 · PDBe 6U79
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