MolNFT v1 · #165801 · protein + DNA
Human SAMHD1 bound to DEOXYRIBO(TG*TTCA)-oligonucleotide
6U6Z: “Human SAMHD1 bound to DEOXYRIBO(TG*TTCA)-oligonucleotide”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #165801 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6U6Z
- Type
- protein + DNA
- Length
- 1,738 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9Y3Z3
- Ligands
- ZN
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 442 | — | Q9Y3Z3 |
| B | — | protein | 429 | — | Q9Y3Z3 |
| C | — | protein | 438 | — | Q9Y3Z3 |
| D | — | protein | 420 | — | Q9Y3Z3 |
| E, F, H | — | dna | 2 | — | — |
| G | — | dna | 3 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6U6Z · Human SAMHD1 bound to deoxyribo(TG*TTCA)-oligonucleotide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y3Z3
- Elsewhere: RCSB PDB 6U6Z · PDBe 6U6Z · UniProt Q9Y3Z3
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