MolNFT v1 · #165743 · protein
KDO8PS structure determined at the euxfel using segmented flow injection
6U57 · 2-dehydro-3-deoxyphosphooctonate aldolase: “KDO8PS structure determined at the euxfel using segmented flow injection”. X-ray diffraction, 2 pockets (best druggability 0.62). MolNFT v1 #165743 on GenesisL1: 3D structure, binding…
- PDB
- 6U57
- Type
- protein
- Length
- 273 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 2-dehydro-3-deoxyphosphooctonate aldolase
- EC
- 2.5.1.55
- UniProt
- A0A140N8Q6
- Pockets
- 2 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) | protein | 273 | 38% helix, 20% strand | A0A140N8Q6 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 234 | 0.62 | 0.82 | 32 | empty |
| 2 | 143 | 0.40 | 0.73 | 19 | empty |
Compared structures
- 6U57 · KDO8PS Structure Determined at the EuXFEL using Segmented Flow Injection · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A140N8Q6
- Elsewhere: RCSB PDB 6U57 · PDBe 6U57 · UniProt A0A140N8Q6
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