MolNFT v1 · #165591 · protein
Double-stranded DNA-specific cytidine deaminase type VI secretion system effector and cognate immunity complex from burkholderia cenocepacia
6U08: “Double-stranded DNA-specific cytidine deaminase type VI secretion system effector and cognate immunity…”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #165591 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6U08
- Type
- protein
- Length
- 1,017 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1V2VU04, A0A1V6L5G6
- Ligands
- ZN
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 133 | — | A0A1V2VU04 |
| B | — | protein | 120 | — | A0A1V6L5G6 |
| D | — | protein | 121 | — | A0A1V6L5G6 |
| E, G | — | protein | 132 | — | A0A1V2VU04 |
| F, H | — | protein | 123 | — | A0A1V6L5G6 |
Ligands and binding sites
- ZN · Zinc ion · metal · 4 copies · chains A, C, E, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6U08 · Double-stranded DNA-specific cytidine deaminase type VI secretion system effector and… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1V2VU04
- Every structure of UniProt A0A1V6L5G6
- Elsewhere: RCSB PDB 6U08 · PDBe 6U08 · UniProt A0A1V2VU04 · UniProt A0A1V6L5G6
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