MolNFT v1 · #165552 · protein + RNA
In situ structure of bmcpv RNA-dependent RNA polymerase at elongation state
6TZ2: “In situ structure of bmcpv RNA-dependent RNA polymerase at elongation state”. Electron microscopy, 3 ligands (ATP, UTP, MG). MolNFT v1 #165552 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6TZ2
- Type
- protein + RNA
- Length
- 1,799 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q993A4, Q9IR43
- Ligands
- ATP, UTP, MG
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1208 | — | Q993A4 |
| B | — | protein | 501 | — | Q9IR43 |
| M | — | rna | 18 | — | — |
| N | — | rna | 36 | — | — |
| T | — | rna | 36 | — | — |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · chains A, N
- UTP · Uridine 5'-triphosphate · ligand · chains A, M, T
- MG · Magnesium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6TZ2 · In situ structure of BmCPV RNA-dependent RNA polymerase at elongation state · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q993A4
- Every structure of UniProt Q9IR43
- Elsewhere: RCSB PDB 6TZ2 · PDBe 6TZ2 · UniProt Q993A4 · UniProt Q9IR43
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