MolNFT v1 · #165194 · protein
Crystal structure of isoform cbd of the basic phospholipase A2 subunit of crotoxin from crotalus durissus terrificus
6TMY: “Crystal structure of isoform cbd of the basic phospholipase A2 subunit of crotoxin from crotalus durissus…”. X-ray diffraction, 2 ligands (NA, CL). MolNFT v1 #165194 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6TMY
- Type
- protein
- Length
- 732 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P62022
- Ligands
- NA, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F | — | protein | 122 | — | P62022 |
Ligands and binding sites
- NA · Sodium ion · metal · 12 copies · chains A, B, C, D, E, F
- CL · Chloride ion · ion · 7 copies · chains A, B, F, C, D, E
- PG4 · Tetraethylene glycol · additive · 13 copies · chains A, F, B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6TMY · Crystal structure of isoform CBd of the basic phospholipase A2 subunit of crotoxin from… · the same entry in another collection · chain C against C, TM-score 1.00
- P62022 · AlphaFold monomer V2.0 prediction for phospholipase A2 crotoxin basic subunit cbc (P62022) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P62022
- Elsewhere: RCSB PDB 6TMY · PDBe 6TMY · UniProt P62022
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