MolNFT v1 · #164974 · RNA
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with N6-methyl-adenosine-5'-triphosphate (M6ATP)
6TFE: “Crystal structure of the ADP-binding domain of the NAD+ riboswitch with N6-methyl-adenosine-5'-triphosphate…”. X-ray diffraction, 4 ligands (N6E, MG, NA). MolNFT v1 #164974 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6TFE
- Type
- RNA
- Length
- 52 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- N6E, MG, NA, BR
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 52 | — | — |
Ligands and binding sites
- N6E · N6-Methyladenosine 5'-triphosphate · ligand · chains A
- MG · Magnesium ion · metal · 10 copies · chains A
- NA · Sodium ion · metal · 4 copies · chains A
- BR · Bromide ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6TFE · Crystal structure of the ADP-binding domain of the NAD+ riboswitch with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6TFE · PDBe 6TFE
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