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MolNFT v1 · #164963 · RNA

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with adenosine diphosphate (ADP)

6TF1: “Crystal structure of the ADP-binding domain of the NAD+ riboswitch with adenosine diphosphate (ADP)”. X-ray diffraction, 2 ligands (MG, NA). MolNFT v1 #164963 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6TF1
Type
RNA
Length
53 nucleotides
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Ligands
MG, NA

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—rna53——

Ligands and binding sites

  • MG · Magnesium ion · metal · 7 copies · chains A
  • NA · Sodium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6TF1 · Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine… · the same entry in another collection · chain A against A, TM-score 0.98

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