MolNFT v1 · #164917 · protein
BAM_5925CDD 5924NDD docking domains
6TDN · Beta-ketoacyl SYNTHASE,BETA-ketoacyl synthase: “BAM_5925CDD 5924NDD docking domains”. Solution nmr, 4 pockets (best druggability 0.43). MolNFT v1 #164917 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6TDN
- Type
- protein
- Length
- 174 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta-ketoacyl SYNTHASE,BETA-ketoacyl synthase
- UniProt
- Q0B303, Q0B304
- Pockets
- 4 · best druggability 0.43
Structure
solution nmr · 1 distinct chain · 48% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Beta-ketoacyl SYNTHASE,BETA-ketoacyl synthase | protein | 87 | 48% helix, 0% strand | Q0B303, Q0B304 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.43 | 0.83 | 16 | empty |
| 2 | 115 | 0.39 | 0.74 | 16 | empty |
| 3 | 131 | 0.38 | 0.74 | 21 | empty |
| 4 | 60 | 0.28 | 0.73 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 1331 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 6TDN · Bam_5925cDD 5924nDD docking domains · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0B303
- Every structure of UniProt Q0B304
- Elsewhere: RCSB PDB 6TDN · PDBe 6TDN · UniProt Q0B303 · UniProt Q0B304
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.