MolNFT v1 · #164854 · protein
Structure of a beta galactosidase with inhibitor
6TBJ: “Structure of a beta galactosidase with inhibitor”. X-ray diffraction, 2 ligands (N0W, NA). MolNFT v1 #164854 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6TBJ
- Type
- protein
- Length
- 4,223 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B3PBE0
- Ligands
- N0W, NA
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 525 | — | B3PBE0 |
| B | — | protein | 524 | — | B3PBE0 |
| C | — | protein | 525 | — | B3PBE0 |
| D | — | protein | 531 | — | B3PBE0 |
| E | — | protein | 532 | — | B3PBE0 |
| F | — | protein | 531 | — | B3PBE0 |
| G | — | protein | 532 | — | B3PBE0 |
| H | — | protein | 523 | — | B3PBE0 |
Ligands and binding sites
- N0W · 5-(dimethylamino)-~{N}-[6-[(2~{S},3~{R},4~{S},5~{R})-3-(hydroxymethyl)-4,5-bis(oxidanyl)piperidin-2-yl]hexyl]naphthalene-1-sulfonamide · ligand · 8 copies · chains A, C, B, H, D, E, G, F
- NA · Sodium ion · metal · 27 copies · chains A, B, C, D, E, F, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6TBJ · Structure of a beta galactosidase with inhibitor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3PBE0
- Elsewhere: RCSB PDB 6TBJ · PDBe 6TBJ · UniProt B3PBE0
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