MolNFT v1 · #164782 · protein

Photorhabdus laumondii subsp. laumondii lectin PLL3

6T96: “Photorhabdus laumondii subsp. laumondii lectin PLL3”. X-ray diffraction, 1 ligand (NA), 1 pocket (best druggability 0.80). MolNFT v1 #164782 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6T96
Type: protein
Length: 348 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lectin PLL3
UniProt: Q7N8I7
Ligands: NA
Pockets: 1 · best druggability 0.80

Structure

x-ray diffraction · 1 distinct chain · 1% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lectin PLL3	protein	348	1% helix, 45% strand	Q7N8I7

Ligands and binding sites

NA · Sodium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	675	0.80	0.84	43	empty

Modifications

Observed in the structure: 1 modified (oxidation).

Compared structures

6T96 · Photorhabdus laumondii subsp. laumondii lectin PLL3 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7N8I7
Elsewhere: RCSB PDB 6T96 · PDBe 6T96 · UniProt Q7N8I7

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