MolNFT v1 · #164719 · protein

Structure of the bottromycin epimerase both in complex with bottromycin A2

6T6Y: “Structure of the bottromycin epimerase both in complex with bottromycin A2”. X-ray diffraction, 1 ligand (MQH), 1 pocket (best druggability 0.70). MolNFT v1 #164719 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6T6Y
Type: protein
Length: 253 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Both
UniProt: K4MHV9
Ligands: MQH
Pockets: 1 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Both	protein	253	43% helix, 19% strand	K4MHV9

Ligands and binding sites

MQH · Bottromycin A2 · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	558	0.70	0.79	33	MQH

Compared structures

6T6Y · Structure of the Bottromycin epimerase BotH in complex with Bottromycin A2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt K4MHV9
Elsewhere: RCSB PDB 6T6Y · PDBe 6T6Y · UniProt K4MHV9

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