MolNFT v1 · #164371 · protein
Human myeloid-derived growth factor (mydgf) in complex with neutralizing Fab
6SVL: “Human myeloid-derived growth factor (mydgf) in complex with neutralizing Fab”. X-ray diffraction. MolNFT v1 #164371 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6SVL
- Type
- protein
- Length
- 3,231 residues
- Chains
- 18
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q969H8
Structure
x-ray diffraction · 12 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 212 | — | — |
| B | — | protein | 210 | — | — |
| C | — | protein | 95 | — | Q969H8 |
| D, H, K, O | — | protein | 213 | — | — |
| E, I, L, M | — | protein | 212 | — | — |
| F | — | protein | 116 | — | Q969H8 |
| G | — | protein | 215 | — | — |
| J | — | protein | 126 | — | Q969H8 |
| N | — | protein | 123 | — | Q969H8 |
| P | — | protein | 191 | — | — |
| Q | — | protein | 123 | — | Q969H8 |
| R | — | protein | 120 | — | Q969H8 |
Ligands and binding sites
- GOL · Glycerol · additive · 3 copies · chains D, E, M, O, P, R
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6SVL · human Myeloid-derived growth factor (MYDGF) in complex with neutralizing Fab · the same entry in another collection · chain R against R, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q969H8
- Elsewhere: RCSB PDB 6SVL · PDBe 6SVL · UniProt Q969H8
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