MolNFT v1 · #164164 · protein
Crystal structure of the vim-2 acquired metallo-beta-lactamase in complex with taniborbactam (vnrx-5133)
6SP7: “Crystal structure of the vim-2 acquired metallo-beta-lactamase in complex with taniborbactam (vnrx-5133)”. X-ray diffraction, 2 ligands (K9B, ZN). MolNFT v1 #164164 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6SP7
- Type
- protein
- Length
- 460 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- S5M6K4
- Ligands
- K9B, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 230 | — | S5M6K4 |
Ligands and binding sites
- K9B · (4~{R})-4-[2-[4-(2-azanylethylamino) cyclohexyl]ethanoylamino]-3,3-bis(oxidanyl)-2-oxa-3-boranuidabicyclo[4.4.0]deca-1(10),6,8-triene-10-carboxylic acid · ligand · 2 copies · chains A, E
- ZN · Zinc ion · metal · 6 copies · chains A, E
- ACT · Acetate ion · additive · 4 copies · chains A, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6SP7 · Crystal Structure of the VIM-2 Acquired Metallo-beta-Lactamase in Complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt S5M6K4
- Elsewhere: RCSB PDB 6SP7 · PDBe 6SP7 · UniProt S5M6K4
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