GL1X · GenesisL1 explorer

MolNFT v1 · #164082 · protein

A. thaliana serine hydroxymethyltransferase isoform 4 (ATSHMT4) in complex with methotrexate

6SMR: “A. thaliana serine hydroxymethyltransferase isoform 4 (ATSHMT4) in complex with methotrexate”. X-ray diffraction. MolNFT v1 #164082 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6SMR
Type
protein
Length
1,894 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
O23254

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein475—O23254
B—protein474—O23254
C—protein472—O23254
D—protein473—O23254

Ligands and binding sites

  • EDO · 1,2-ethanediol · additive · 9 copies · chains A, D, B, C
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • O23254 · AlphaFold monomer V2.0 prediction for serine hydroxymethyltransferase 4 (O23254) · a predicted model of the same protein · chain D against A, TM-score 0.99

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