MolNFT v1 · #164079 · protein
ANTDE:ANTF (apo): type II pks acyl-carrier protein in complex with its ketosynthase bound to the hexaketide
6SMO: “ANTDE:ANTF (apo): type II pks acyl-carrier protein in complex with its ketosynthase bound to the hexaketide”. X-ray diffraction, 3 ligands (LKZ, NA, SO4). MolNFT v1 #164079 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6SMO
- Type
- protein
- Length
- 2,351 residues
- Chains
- 7
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A2S8QL96, Q7MZT3, Q7MZT4
- Ligands
- LKZ, NA, SO4
Structure
x-ray diffraction · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 71 | — | A0A2S8QL96 |
| B | — | protein | 408 | — | Q7MZT3 |
| C | — | protein | 347 | — | Q7MZT4 |
| D | — | protein | 410 | — | Q7MZT3 |
| E | — | protein | 352 | — | Q7MZT4 |
| F | — | protein | 408 | — | Q7MZT3 |
| G | — | protein | 355 | — | Q7MZT4 |
Ligands and binding sites
- LKZ · 3,5,7,9,11-pentakis(oxidanylidene)dodecanal · ligand · 3 copies · chains B, C, D, E, F, G
- NA · Sodium ion · metal · 2 copies · chains D
- SO4 · Sulfate ion · ion · chains E, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6SMO · AntDE:AntF (apo): type II PKS acyl-carrier protein in complex with its ketosynthase bound… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2S8QL96
- Every structure of UniProt Q7MZT3
- Every structure of UniProt Q7MZT4
- Elsewhere: RCSB PDB 6SMO · PDBe 6SMO · UniProt A0A2S8QL96 · UniProt Q7MZT3 · UniProt Q7MZT4
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